Class SequenceReference

java.lang.Object
org.snpeff.binseq.comparator.SequenceReference

public class SequenceReference extends Object
A reference to a sequence. It's composed by a sequence index and a start position (both are integres stored in a long)
Author:
pcingola
  • Constructor Details

    • SequenceReference

      public SequenceReference()
  • Method Details

    • getReference

      public static long getReference(int sequenceIdx, int start)
    • getSeqIdx

      public static int getSeqIdx(long ref)
    • getStart

      public static int getStart(long ref)