Class VariantEffectFilter

java.lang.Object
org.snpeff.filter.VariantEffectFilter
All Implemented Interfaces:
Filter<VariantEffect>

public class VariantEffectFilter extends Object implements Filter<VariantEffect>
A Generic ChangeEffect filter
Author:
pcingola
  • Constructor Details

    • VariantEffectFilter

      public VariantEffectFilter()
  • Method Details

    • add

      public void add(EffectType effType)
    • anythingSet

      public boolean anythingSet()
      Is any of the options set?
      Specified by:
      anythingSet in interface Filter<VariantEffect>
      Returns:
    • filter

      public boolean filter(VariantEffect variantEffect)
      Filter a sequence change
      Specified by:
      filter in interface Filter<VariantEffect>
      Parameters:
      variantEffect -
      Returns:
      true if it passes the filter