Package org.snpeff.nextProt
Class NextProtXmlIsoform
java.lang.Object
org.snpeff.nextProt.NextProtXmlNode
org.snpeff.nextProt.NextProtXmlIsoform
Mimics the 'isoform-mapping' in a NextProt XML file
- Author:
- Pablo Cingolani
-
Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionvoid
addProteinMapping
(Attributes attributes) Add a transcript mappingvoid
addTranscriptMapping
(Attributes attributes) Add a protein mappingvoid
setSequence
(String sequence) Add an Isoform sequencetoString()
Methods inherited from class org.snpeff.nextProt.NextProtXmlNode
getAccession