Package org.snpeff.interval
Enum Class TranscriptSupportLevel
- All Implemented Interfaces:
Serializable
,Comparable<TranscriptSupportLevel>
,Constable
Transcript level support
Reference: http://useast.ensembl.org/Help/Glossary?id=492;redirect=no
- Author:
- pcingola
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Nested Class Summary
Nested classes/interfaces inherited from class java.lang.Enum
Enum.EnumDesc<E extends Enum<E>>
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Enum Constant Summary
Enum ConstantsEnum ConstantDescriptionThe transcript was not analyzed for one of the following reasons: pseudo-gene annotation, including transcribed pseudo-genes human leukocyte antigen (HLA) transcript immunoglobin gene transcript T-cell receptor transcript single-exon transcript (will be included in a future version) -
Field Summary
Fields -
Method Summary
Modifier and TypeMethodDescriptionstatic TranscriptSupportLevel
static int
Return TSL level (-1 if not available / invalid)static TranscriptSupportLevel
Returns the enum constant of this class with the specified name.static TranscriptSupportLevel[]
values()
Returns an array containing the constants of this enum class, in the order they are declared.
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Enum Constant Details
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TSL_1
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TSL_2
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TSL_3
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TSL_4
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TSL_5
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TSL_NA
The transcript was not analyzed for one of the following reasons: pseudo-gene annotation, including transcribed pseudo-genes human leukocyte antigen (HLA) transcript immunoglobin gene transcript T-cell receptor transcript single-exon transcript (will be included in a future version)
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Field Details
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TSL_NULL_VALUE
public static final int TSL_NULL_VALUE- See Also:
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Method Details
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values
Returns an array containing the constants of this enum class, in the order they are declared.- Returns:
- an array containing the constants of this enum class, in the order they are declared
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valueOf
Returns the enum constant of this class with the specified name. The string must match exactly an identifier used to declare an enum constant in this class. (Extraneous whitespace characters are not permitted.)- Parameters:
name
- the name of the enum constant to be returned.- Returns:
- the enum constant with the specified name
- Throws:
IllegalArgumentException
- if this enum class has no constant with the specified nameNullPointerException
- if the argument is null
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parse
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tsl
Return TSL level (-1 if not available / invalid)
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