Helper structure for a found isotope pattern used in FeatureFinderAlgorithmPicked. More...
#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h>
| Public Member Functions | |
| IsotopePattern (Size size) | |
| Constructor that resizes the internal vectors.  More... | |
| Public Attributes | |
| std::vector< SignedSize > | peak | 
| Peak index (-1 if peak was not found, -2 if it was removed to improve the isotope fit)  More... | |
| std::vector< Size > | spectrum | 
| Spectrum index (undefined if peak index is -1 or -2)  More... | |
| std::vector< DoubleReal > | intensity | 
| Peak intensity (0 if peak index is -1 or -2)  More... | |
| std::vector< DoubleReal > | mz_score | 
| m/z score of peak (0 if peak index is -1 or -2)  More... | |
| std::vector< DoubleReal > | theoretical_mz | 
| Theoretical m/z value of the isotope peak.  More... | |
| TheoreticalIsotopePattern | theoretical_pattern | 
| Theoretical isotope pattern.  More... | |
Helper structure for a found isotope pattern used in FeatureFinderAlgorithmPicked.
| 
 | inline | 
Constructor that resizes the internal vectors.
| std::vector<DoubleReal> intensity | 
Peak intensity (0 if peak index is -1 or -2)
Referenced by FeatureFinderAlgorithmPicked< PeakType, FeatureType >::findIsotope_(), and FeatureFinderAlgorithmPicked< PeakType, FeatureType >::isotopeScore_().
| std::vector<DoubleReal> mz_score | 
m/z score of peak (0 if peak index is -1 or -2)
Referenced by FeatureFinderAlgorithmPicked< PeakType, FeatureType >::findIsotope_(), and FeatureFinderAlgorithmPicked< PeakType, FeatureType >::isotopeScore_().
| std::vector<SignedSize> peak | 
Peak index (-1 if peak was not found, -2 if it was removed to improve the isotope fit)
Referenced by FeatureFinderAlgorithmPicked< PeakType, FeatureType >::extendMassTraces_(), FeatureFinderAlgorithmPicked< PeakType, FeatureType >::findIsotope_(), FeatureFinderAlgorithmPicked< PeakType, FeatureType >::isotopeScore_(), and FeatureFinderAlgorithmPicked< PeakType, FeatureType >::run().
| std::vector<Size> spectrum | 
Spectrum index (undefined if peak index is -1 or -2)
Referenced by FeatureFinderAlgorithmPicked< PeakType, FeatureType >::extendMassTraces_(), and FeatureFinderAlgorithmPicked< PeakType, FeatureType >::findIsotope_().
| std::vector<DoubleReal> theoretical_mz | 
Theoretical m/z value of the isotope peak.
Referenced by FeatureFinderAlgorithmPicked< PeakType, FeatureType >::findIsotope_().
| TheoreticalIsotopePattern theoretical_pattern | 
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:34 using doxygen 1.8.5 |