Implements a fitter for the Gamma distribution. More...
#include <OpenMS/MATH/STATISTICS/GammaDistributionFitter.h>
| Classes | |
| struct | GammaDistributionFitResult | 
| struct to represent the parameters of a gamma distribution  More... | |
| Public Member Functions | |
| GammaDistributionFitter () | |
| Default constructor.  More... | |
| virtual | ~GammaDistributionFitter () | 
| Destructor.  More... | |
| void | setInitialParameters (const GammaDistributionFitResult &result) | 
| sets the gamma distribution start parameters b and p for the fitting  More... | |
| GammaDistributionFitResult | fit (std::vector< DPosition< 2 > > &points) | 
| Fits a gamma distribution to the given data points.  More... | |
| const String & | getGnuplotFormula () const | 
| returns the gnuplot formula of the fitted gamma distribution  More... | |
| Protected Member Functions | |
| void | printState_ (size_t iter, gsl_multifit_fdfsolver *s) | 
| Static Protected Member Functions | |
| static int | gammaDistributionFitterf_ (const gsl_vector *x, void *params, gsl_vector *f) | 
| static int | gammaDistributionFitterdf_ (const gsl_vector *x, void *params, gsl_matrix *J) | 
| static int | gammaDistributionFitterfdf_ (const gsl_vector *x, void *params, gsl_vector *f, gsl_matrix *J) | 
| Protected Attributes | |
| GammaDistributionFitResult | init_param_ | 
| String | gnuplot_formula_ | 
| Private Member Functions | |
| GammaDistributionFitter (const GammaDistributionFitter &rhs) | |
| Copy constructor (not implemented)  More... | |
| GammaDistributionFitter & | operator= (const GammaDistributionFitter &rhs) | 
| assignment operator (not implemented)  More... | |
Implements a fitter for the Gamma distribution.
This class fits a Gamma distribution to a number of data points. The results as well as the initial guess are specified using the struct GammaDistributionFitResult.
The formula with the fitted parameters can be transformed into a gnuplot formula using getGnuplotFormulai() after fitting.
The implementation is done using GSL fitting algorithms.
Default constructor.
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 | virtual | 
Destructor.
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 | private | 
Copy constructor (not implemented)
| GammaDistributionFitResult fit | ( | std::vector< DPosition< 2 > > & | points | ) | 
Fits a gamma distribution to the given data points.
| points | Input parameter which represents the point used for the fitting | 
| Exception::UnableToFit | is thrown if fitting cannot be performed | 
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 | staticprotected | 
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 | staticprotected | 
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 | staticprotected | 
| const String& getGnuplotFormula | ( | ) | const | 
returns the gnuplot formula of the fitted gamma distribution
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 | private | 
assignment operator (not implemented)
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 | protected | 
| void setInitialParameters | ( | const GammaDistributionFitResult & | result | ) | 
sets the gamma distribution start parameters b and p for the fitting
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 | protected | 
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 | protected | 
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:38 using doxygen 1.8.5 |