35 #ifndef OPENMS_FORMAT_FILETYPES_H 
   36 #define OPENMS_FORMAT_FILETYPES_H 
   38 #include <OpenMS/config.h> 
  105     static String typeToName(Type type);
 
  108     static String typeToMZML(Type type);
 
  111     static Type nameToType(
const String& name);
 
  121     static std::map<Type, String> initializeMap_();
 
  124     static std::map<Type, String> initializeMZMLMap_();
 
  130 #endif //OPENMS_FORMAT_FILETYPES_H 
OpenMS parameters file with workflow information (.toppas) 
Definition: FileTypes.h:71
Type
Actual file types enum. 
Definition: FileTypes.h:59
msInspect file (.tsv) 
Definition: FileTypes.h:87
NIST spectra library file format (.msp) 
Definition: FileTypes.h:82
A more convenient string class. 
Definition: String.h:56
MS2 file (.ms2) 
Definition: FileTypes.h:74
XSD schema format. 
Definition: FileTypes.h:99
FASTA file (.fasta) 
Definition: FileTypes.h:91
OpenMS identification format (.idXML) 
Definition: FileTypes.h:67
MzData file (.mzData) 
Definition: FileTypes.h:64
NCBI binary blast db. 
Definition: FileTypes.h:100
general comma separated files format (might also be tab or space separated!!!), data should be regula...
Definition: FileTypes.h:93
Portable Network Graphics (.png) 
Definition: FileTypes.h:85
specArray file (.peplist) 
Definition: FileTypes.h:88
Centralizes the file types recognized by FileHandler. 
Definition: FileTypes.h:54
mzQuantML (HUPO PSI AnalysisXML followup format) (.mzq) 
Definition: FileTypes.h:78
OpenMS consensus map format (.consensusXML) 
Definition: FileTypes.h:68
OMSSA XML file format for peptide identifications (.xml) 
Definition: FileTypes.h:83
analysisXML format 
Definition: FileTypes.h:98
Mascot XML file format for peptide identifications (.xml) 
Definition: FileTypes.h:84
enhanced comma separated files (RT, m/z, Intensity, [meta]) 
Definition: FileTypes.h:92
TPP protXML file (.protXML) 
Definition: FileTypes.h:76
Unknown file extension. 
Definition: FileTypes.h:61
mzIdentML (HUPO PSI AnalysisXML followup format) (.mzid) 
Definition: FileTypes.h:77
DTA file (.dta) 
Definition: FileTypes.h:62
XMass Analysis file (fid) 
Definition: FileTypes.h:86
kroenik file (.kroenik) 
Definition: FileTypes.h:90
TraML (HUPO PSI format) for transitions (.traML) 
Definition: FileTypes.h:81
mzQualityML (will undergo standardisation maybe) (.qcml) 
Definition: FileTypes.h:79
any text format, which has only loose definition of what it actually contains – thus it is usually ha...
Definition: FileTypes.h:94
any HTML format 
Definition: FileTypes.h:96
OpenMS feature file (.featureXML) 
Definition: FileTypes.h:66
Controlled Vocabulary format. 
Definition: FileTypes.h:95
Tranformation description file (.trafoXML) 
Definition: FileTypes.h:72
static const std::map< Type, String > name_of_types_
Maps the FileType::Type to the preferred extension. 
Definition: FileTypes.h:115
any XML format 
Definition: FileTypes.h:97
static const std::map< Type, String > name_of_MZMLtypes_
Maps the FileType::Type to the preferred mzML CV name. 
Definition: FileTypes.h:118
hardkloer file (.hardkloer) 
Definition: FileTypes.h:89
GelML (HUPO PSI format) (.gelML) 
Definition: FileTypes.h:80
DTA2D file (.dta2d) 
Definition: FileTypes.h:63
Mascot Generic Format (.mgf) 
Definition: FileTypes.h:69
MzML file (.mzML) 
Definition: FileTypes.h:73
OpenMS parameters file (.ini) 
Definition: FileTypes.h:70
MzXML file (.mzXML) 
Definition: FileTypes.h:65
TPP pepXML file (.pepXML) 
Definition: FileTypes.h:75