Util which can be used to evaluate pairs of MRM experiments
The command line parameters of this tool are:
MRMPairFinder -- Util which can be used to evaluate labeled pair ratios on MRM features.
Version: 1.11.1 Nov 14 2013, 11:18:15, Revision: 11976
Usage:
  MRMPairFinder <options>
Options (mandatory options marked with '*'):
  -in <file>*          Input featureXML file containing the features of the MRM experiment spectra. (valid 
                       formats: 'featureXML')
  -pair_in <file>*     Pair-file in the format: prec-m/z-light prec-m/z-heavy frag-m/z-light frag-m/z-heavy 
                       rt (valid formats: 'csv')
  -out <file>*         Output consensusXML file were the pairs of the features will be written to. (valid 
                       formats: 'consensusXML')
  -feature_out <file>  Output featureXML file, only written if given, skipped otherwise. (valid formats: 'fea
                       tureXML')
                       
Common UTIL options:
  -ini <file>          Use the given TOPP INI file
  -threads <n>         Sets the number of threads allowed to be used by the TOPP tool (default: '1')
  -write_ini <file>    Writes the default configuration file
  --help               Shows options
  --helphelp           Shows all options (including advanced)
INI file documentation of this tool:
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:24 using doxygen 1.8.5 |