|  MapAlignerBase | Base class for different MapAligner TOPP tools | 
|  DBExporter | Extracts MS data from a OpenMS database | 
|  DBImporter | Imports an mzML file to an OpenMS database | 
|  FeatureLinkerBase | Base class for different FeatureLinker tools | 
|  PhosphoScoring | Tool to score phosphorylation sites of a peptide. | 
|  PILISIdentification | Performs an ProteinIdentification with PILIS | 
|  PILISModelCV | Perform a cross validation of the PILIS model parameters | 
|  PILISModelTrainer | Train the PILIS model with a given set of spectra and identifications | 
|  PILISSpectraGenerator | Generate spectra given a list of peptides and a PILIS model | 
|  SequestAdapter | Identifies peptides in MS/MS spectra via Sequest | 
|  Experimental List | |
|  Improvements List | |
|  Todo List | |
|  Deprecated List | 
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:20:58 using doxygen 1.8.5 |