Meta information about digestion of a sample. More...
#include <OpenMS/METADATA/Digestion.h>
 
  
 | Public Member Functions | |
| Digestion () | |
| default constructor  More... | |
| Digestion (const Digestion &) | |
| copy constructor  More... | |
| virtual | ~Digestion () | 
| destructor  More... | |
| Digestion & | operator= (const Digestion &) | 
| assignment operator  More... | |
| virtual bool | operator== (const SampleTreatment &rhs) const | 
| Equality operator.  More... | |
| virtual SampleTreatment * | clone () const | 
| clone method. See SampleTreatment  More... | |
| const String & | getEnzyme () const | 
| returns the enzyme name (default is "")  More... | |
| void | setEnzyme (const String &enzyme) | 
| sets the enzyme name  More... | |
| DoubleReal | getDigestionTime () const | 
| returns the digestion time in minutes (default is 0.0)  More... | |
| void | setDigestionTime (DoubleReal digestion_time) | 
| sets the digestion time in minutes  More... | |
| DoubleReal | getTemperature () const | 
| return the temperature during digestion in degree C (default is 0.0)  More... | |
| void | setTemperature (DoubleReal temperature) | 
| sets the temperature during digestion in degree C  More... | |
| DoubleReal | getPh () const | 
| returns the pH value (default is 0.0)  More... | |
| void | setPh (DoubleReal ph) | 
| sets the pH value  More... | |
|  Public Member Functions inherited from SampleTreatment | |
| SampleTreatment (const String &type) | |
| Constructor.  More... | |
| SampleTreatment (const SampleTreatment &) | |
| Copy constructor.  More... | |
| virtual | ~SampleTreatment () | 
| destructor  More... | |
| SampleTreatment & | operator= (const SampleTreatment &) | 
| Assignment operator.  More... | |
| const String & | getType () const | 
| return the treatment type  More... | |
| const String & | getComment () const | 
| returns the description of the sample treatment  More... | |
| void | setComment (const String &comment) | 
| sets the description of the sample treatment  More... | |
|  Public Member Functions inherited from MetaInfoInterface | |
| MetaInfoInterface () | |
| constructor  More... | |
| MetaInfoInterface (const MetaInfoInterface &rhs) | |
| copy constructor  More... | |
| ~MetaInfoInterface () | |
| destructor  More... | |
| MetaInfoInterface & | operator= (const MetaInfoInterface &rhs) | 
| assignment operator  More... | |
| bool | operator== (const MetaInfoInterface &rhs) const | 
| Equality operator.  More... | |
| bool | operator!= (const MetaInfoInterface &rhs) const | 
| Equality operator.  More... | |
| const DataValue & | getMetaValue (const String &name) const | 
| returns the value corresponding to a string  More... | |
| const DataValue & | getMetaValue (UInt index) const | 
| returns the value corresponding to an index  More... | |
| bool | metaValueExists (const String &name) const | 
| returns if this MetaInfo is set  More... | |
| bool | metaValueExists (UInt index) const | 
| returns if this MetaInfo is set  More... | |
| void | setMetaValue (const String &name, const DataValue &value) | 
| sets the DataValue corresponding to a name  More... | |
| void | setMetaValue (UInt index, const DataValue &value) | 
| sets the DataValue corresponding to an index  More... | |
| void | removeMetaValue (const String &name) | 
| Removes the DataValue corresponding to nameif it exists.  More... | |
| void | removeMetaValue (UInt index) | 
| Removes the DataValue corresponding to indexif it exists.  More... | |
| void | getKeys (std::vector< String > &keys) const | 
| fills the given vector with a list of all keys for which a value is set  More... | |
| void | getKeys (std::vector< UInt > &keys) const | 
| fills the given vector with a list of all keys for which a value is set  More... | |
| bool | isMetaEmpty () const | 
| returns if the MetaInfo is empty  More... | |
| void | clearMetaInfo () | 
| removes all meta values  More... | |
| Protected Attributes | |
| String | enzyme_ | 
| DoubleReal | digestion_time_ | 
| DoubleReal | temperature_ | 
| DoubleReal | ph_ | 
|  Protected Attributes inherited from SampleTreatment | |
| String | type_ | 
| String | comment_ | 
|  Protected Attributes inherited from MetaInfoInterface | |
| MetaInfo * | meta_ | 
| pointer to the MetaInfo object. 0 by default  More... | |
| Additional Inherited Members | |
|  Static Public Member Functions inherited from MetaInfoInterface | |
| static MetaInfoRegistry & | metaRegistry () | 
| retuns a reference to the MetaInfoRegistry  More... | |
|  Protected Member Functions inherited from MetaInfoInterface | |
| void | createIfNotExists_ () | 
| creates the MetaInfo object if it does not exist  More... | |
Meta information about digestion of a sample.
Representation of a digestion.
| Digestion | ( | ) | 
default constructor
| 
 | virtual | 
destructor
| 
 | virtual | 
clone method. See SampleTreatment
Implements SampleTreatment.
| DoubleReal getDigestionTime | ( | ) | const | 
returns the digestion time in minutes (default is 0.0)
| const String& getEnzyme | ( | ) | const | 
returns the enzyme name (default is "")
| DoubleReal getPh | ( | ) | const | 
returns the pH value (default is 0.0)
| DoubleReal getTemperature | ( | ) | const | 
return the temperature during digestion in degree C (default is 0.0)
| 
 | virtual | 
Equality operator.
Although this operator takes a reference to a SampleTreatment as argument it tests for the equality of Tagging instances!
Reimplemented from SampleTreatment.
| void setDigestionTime | ( | DoubleReal | digestion_time | ) | 
sets the digestion time in minutes
| void setEnzyme | ( | const String & | enzyme | ) | 
sets the enzyme name
| void setPh | ( | DoubleReal | ph | ) | 
sets the pH value
| void setTemperature | ( | DoubleReal | temperature | ) | 
sets the temperature during digestion in degree C
| 
 | protected | 
| 
 | protected | 
| 
 | protected | 
| 
 | protected | 
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:32 using doxygen 1.8.5 |