| abortPipeline() | TOPPASBase | slot | 
  | activeWindow_() const | TOPPASBase | protected | 
  | addTOPPASFile(const String &file_name, bool in_new_window=true) | TOPPASBase | slot | 
  | blocks_list_ | TOPPASBase | protected | 
  | check_defaults_ | DefaultParamHandler | protected | 
  | clipboard_scene_ | TOPPASBase | protected | 
  | closeByTab(int id) | TOPPASBase | protectedslot | 
  | closeEvent(QCloseEvent *event) | TOPPASBase | protected | 
  | closeFile() | TOPPASBase | slot | 
  | createTOPPToolsTreeWidget(QWidget *parent_widget=0) | TOPPASBase | static | 
  | current_path_ | TOPPASBase | protected | 
  | DefaultParamHandler(const String &name) | DefaultParamHandler |  | 
  | DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler |  | 
  | defaults_ | DefaultParamHandler | protected | 
  | defaultsToParam_() | DefaultParamHandler | protected | 
  | desc_ | TOPPASBase | protected | 
  | descriptionUpdated_() | TOPPASBase | protectedslot | 
  | downloadTOPPASfromHomepage_(const QUrl &url) | TOPPASBase | protectedslot | 
  | error_name_ | DefaultParamHandler | protected | 
  | exportAsImage() | TOPPASBase | slot | 
  | focusByTab(int id) | TOPPASBase | protectedslot | 
  | getDefaults() const | DefaultParamHandler |  | 
  | getName() const | DefaultParamHandler |  | 
  | getParameters() const | DefaultParamHandler |  | 
  | getSubsections() const | DefaultParamHandler |  | 
  | IDINITIALUNTITLED | TOPPASBase | static | 
  | includePipeline() | TOPPASBase | slot | 
  | insertNewVertex_(double x, double y, QTreeWidgetItem *item=0) | TOPPASBase | protectedslot | 
  | insertNewVertexInCenter_(QTreeWidgetItem *item) | TOPPASBase | protectedslot | 
  | keyPressEvent(QKeyEvent *e) | TOPPASBase | protected | 
  | loadFiles(const StringList &list, QSplashScreen *splash_screen) | TOPPASBase |  | 
  | loadPipelineResourceFile() | TOPPASBase | slot | 
  | loadPipelineResourceFile(TOPPASWidget *w, QString current_path) | TOPPASBase | static | 
  | loadPreferences(String filename="") | TOPPASBase |  | 
  | log_ | TOPPASBase | protected | 
  | LogState enum name | TOPPASBase | protected | 
  | LS_ERROR enum value | TOPPASBase | protected | 
  | LS_NOTICE enum value | TOPPASBase | protected | 
  | LS_WARNING enum value | TOPPASBase | protected | 
  | message_label_ | TOPPASBase | protected | 
  | network_manager_ | TOPPASBase | protected | 
  | newPipeline(const int id=-1) | TOPPASBase | slot | 
  | node_offset_ | TOPPASBase | protectedstatic | 
  | openExampleDialog() | TOPPASBase | slot | 
  | openFileDialog() | TOPPASBase | slot | 
  | openFilesInTOPPView(QStringList all_files) | TOPPASBase | slot | 
  | openOnlinePipelineRepository() | TOPPASBase | slot | 
  | openToppasFile(QString filename) | TOPPASBase | slot | 
  | operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual | 
  | operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual | 
  | outputVertexFinished(const String &file) | TOPPASBase | slot | 
  | param_ | DefaultParamHandler | protected | 
  | preferencesDialog() | TOPPASBase | slot | 
  | refreshParameters() | TOPPASBase | slot | 
  | refreshPipelineParameters(TOPPASWidget *tw, QString current_path) | TOPPASBase | static | 
  | runPipeline() | TOPPASBase | slot | 
  | saveCurrentPipelineAs() | TOPPASBase | slot | 
  | savePipeline() | TOPPASBase | slot | 
  | savePipelineAs(TOPPASWidget *w, QString current_path) | TOPPASBase | static | 
  | savePipelineResourceFile() | TOPPASBase | slot | 
  | savePipelineResourceFile(TOPPASWidget *w, QString current_path) | TOPPASBase | static | 
  | savePreferences() | TOPPASBase |  | 
  | saveToClipboard(TOPPASScene *scene) | TOPPASBase | slot | 
  | sendClipboardContent() | TOPPASBase | slot | 
  | setName(const String &name) | DefaultParamHandler |  | 
  | setParameters(const Param ¶m) | DefaultParamHandler |  | 
  | showAboutDialog() | TOPPASBase | slot | 
  | showAsWindow_(TOPPASWidget *sw, const String &caption, const int special_id=-1) | TOPPASBase | protectedslot | 
  | showCursorStatus(double x, double y) | TOPPASBase | slot | 
  | showLogMessage_(LogState state, const String &heading, const String &body) | TOPPASBase | protected | 
  | showPipelineFinishedLogMessage() | TOPPASBase | slot | 
  | showStatusMessage(std::string msg, OpenMS::UInt time) | TOPPASBase | slot | 
  | showURL() | TOPPASBase | slot | 
  | subsections_ | DefaultParamHandler | protected | 
  | tab_bar_ | TOPPASBase | protected | 
  | tmp_path_ | TOPPASBase | protected | 
  | tool_bar_ | TOPPASBase | protected | 
  | toolCrashed() | TOPPASBase | slot | 
  | toolFailed() | TOPPASBase | slot | 
  | toolFinished() | TOPPASBase | slot | 
  | tools_tree_view_ | TOPPASBase | protected | 
  | toolStarted() | TOPPASBase | slot | 
  | TOPPASBase(QWidget *parent=0) | TOPPASBase |  | 
  | toppasFileDownloaded_(QNetworkReply *r) | TOPPASBase | protectedslot | 
  | updateCurrentPath() | TOPPASBase | slot | 
  | updateMembers_() | DefaultParamHandler | protectedvirtual | 
  | updateMenu() | TOPPASBase | protectedslot | 
  | updateTabBar(QWidget *w) | TOPPASBase | slot | 
  | updateToolBar() | TOPPASBase | slot | 
  | updateTOPPOutputLog(const QString &out) | TOPPASBase | slot | 
  | warn_empty_defaults_ | DefaultParamHandler | protected | 
  | webview_ | TOPPASBase | protected | 
  | window_(int id) const | TOPPASBase | protected | 
  | ws_ | TOPPASBase | protected | 
  | z_value_ | TOPPASBase | protectedstatic | 
  | ~DefaultParamHandler() | DefaultParamHandler | virtual | 
  | ~TOPPASBase() | TOPPASBase | virtual |