| ActionMode enum name | XMLHandler |  | 
  | actual_peptide_hit_ | MascotXMLHandler | private | 
  | actual_protein_hit_ | MascotXMLHandler | private | 
  | actual_query_ | MascotXMLHandler | private | 
  | actual_title_ | MascotXMLHandler | private | 
  | asBool_(const String &in) | XMLHandler | inlineprotected | 
  | asDateTime_(String date_string) | XMLHandler | inlineprotected | 
  | asDouble_(const String &in) | XMLHandler | inlineprotected | 
  | asFloat_(const String &in) | XMLHandler | inlineprotected | 
  | asInt_(const String &in) | XMLHandler | inlineprotected | 
  | asInt_(const XMLCh *in) | XMLHandler | inlineprotected | 
  | asUInt_(const String &in) | XMLHandler | inlineprotected | 
  | attributeAsDouble_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | attributeAsDouble_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | attributeAsDoubleList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | attributeAsDoubleList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | attributeAsInt_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | attributeAsInt_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | attributeAsIntList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | attributeAsIntList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | attributeAsString_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | attributeAsString_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | attributeAsStringList_(const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | attributeAsStringList_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | character_buffer_ | MascotXMLHandler | private | 
  | characters(const XMLCh *const chars, const XMLSize_t) | MascotXMLHandler | virtual | 
  | cv_terms_ | XMLHandler | protected | 
  | cvStringToEnum_(const Size section, const String &term, const char *message, const SignedSize result_on_error=0) | XMLHandler | inlineprotected | 
  | date_ | MascotXMLHandler | private | 
  | date_time_string_ | MascotXMLHandler | private | 
  | endElement(const XMLCh *const , const XMLCh *const , const XMLCh *const qname) | MascotXMLHandler | virtual | 
  | equal_(const XMLCh *a, const XMLCh *b) | XMLHandler | inlineprotected | 
  | error(const xercesc::SAXParseException &exception) | XMLHandler |  | 
  | error(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler |  | 
  | error_message_ | XMLHandler | mutableprotected | 
  | errorString() | XMLHandler |  | 
  | fatalError(const xercesc::SAXParseException &exception) | XMLHandler |  | 
  | fatalError(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler |  | 
  | file_ | XMLHandler | protected | 
  | id_data_ | MascotXMLHandler | private | 
  | identifier_ | MascotXMLHandler | private | 
  | LOAD enum value | XMLHandler |  | 
  | major_version_ | MascotXMLHandler | private | 
  | MascotXMLHandler(ProteinIdentification &protein_identification, std::vector< PeptideIdentification > &identifications, const String &filename, std::map< String, std::vector< AASequence > > &peptides, const RTMapping &rt_mapping=RTMapping(), const String &scan_regex="") | MascotXMLHandler |  | 
  | minor_version_ | MascotXMLHandler | private | 
  | modified_peptides_ | MascotXMLHandler | private | 
  | no_rt_error_ | MascotXMLHandler | private | 
  | open_tags_ | XMLHandler | protected | 
  | optionalAttributeAsDouble_(DoubleReal &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsDouble_(DoubleReal &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | inlineprotected | 
  | optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | inlineprotected | 
  | peptide_identification_index_ | MascotXMLHandler | private | 
  | primary_scan_regex | MascotXMLHandler | static | 
  | protein_identification_ | MascotXMLHandler | private | 
  | reset() | XMLHandler |  | 
  | rt_mapping_ | MascotXMLHandler | private | 
  | RTMapping typedef | MascotXMLHandler |  | 
  | scan_regex_ | MascotXMLHandler | private | 
  | search_parameters_ | MascotXMLHandler | private | 
  | sm_ | XMLHandler | protected | 
  | startElement(const XMLCh *const , const XMLCh *const , const XMLCh *const qname, const xercesc::Attributes &attributes) | MascotXMLHandler | virtual | 
  | STORE enum value | XMLHandler |  | 
  | tag_ | MascotXMLHandler | private | 
  | tags_open_ | MascotXMLHandler | private | 
  | version_ | XMLHandler | protected | 
  | warning(const xercesc::SAXParseException &exception) | XMLHandler |  | 
  | warning(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const | XMLHandler |  | 
  | writeTo(std::ostream &) | XMLHandler | inlinevirtual | 
  | writeUserParam_(const String &tag_name, std::ostream &os, const MetaInfoInterface &meta, UInt indent) const | XMLHandler | protected | 
  | XMLHandler(const String &filename, const String &version) | XMLHandler |  | 
  | ~MascotXMLHandler() | MascotXMLHandler | virtual | 
  | ~XMLHandler() | XMLHandler | virtual |