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|  | ~SHFeature () | 
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|  | SHFeature (const SHFeature &) | 
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|  | SHFeature (const SHFeature *) | 
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|  | SHFeature (double, double, int, int, int, int, float, float, float) | 
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|  | SHFeature (float, int, int) | 
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|  | SHFeature (MS2Feature *) | 
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|  | SHFeature () | 
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| SHFeature & | operator= (const SHFeature &) | 
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| void | show_info () | 
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| void | showMS2consensSpectraInfo () | 
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| bool | operator== (const SHFeature &) | 
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| void | add_MS2_info (MS2Info *) | 
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| void | add_MS2_info (std::map< double, std::vector< MS2Info > > *) | 
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| bool | get_MS2_info () | 
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| bool | get_MS2_info (double) | 
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| bool | check_MS2_empty () | 
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| void | removeAllMS2Information () | 
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| int | get_MS2_SCANS_SIZE () | 
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| std::map< double, std::vector < MS2Info > > *
 | get_MS2_SCAN_MAP () | 
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| std::map< double, std::vector < MS2Info > >::iterator
 | get_MS2_SCANS_START () | 
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| std::map< double, std::vector < MS2Info > >::iterator
 | get_MS2_SCANS_END () | 
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| MS2Info * | get_best_MS2_SCAN () | 
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| MS2Info * | get_best_MS2_SCAN (double) | 
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| void | setFeatureExtraInformation (std::string in) | 
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| std::string | getFeatureExtraInformation () | 
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| void | add_matched_feature (SHFeature *) | 
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| std::map< int, SHFeature > * | get_match_list_REFERENCE () | 
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| std::map< int, SHFeature > | get_match_list () | 
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| std::map< int, SHFeature > ::iterator
 | get_match_list_start () | 
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| std::map< int, SHFeature > ::iterator
 | get_match_list_end () | 
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| std::map< int, SHFeature > ::iterator
 | find_match_by_id (int ID) | 
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| SHFeature * | get_feature (int) | 
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| double | get_MATCHED_peak_area () | 
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| bool | check_match_by_id (int) | 
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| void | erase_match_list () | 
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| std::map< int, double > | get_feature_profile () | 
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| int | get_replicate_match_nb () | 
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| int | get_matching_nb () | 
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| double | get_replicate_intensity_sum () | 
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| double | get_MZ () | 
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| void | set_MZ (double in) | 
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| double | get_MZ_START () | 
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| void | set_MZ_START (double IN) | 
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| double | get_MZ_END () | 
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| void | set_MZ_END (double IN) | 
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| double | get_THEO_MZ () | 
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| double | get_THEO_MZ (double T) | 
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| std::string | get_AC () | 
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| std::string | get_AC (double T) | 
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| bool | check_AC (std::string IN) | 
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| bool | check_AC (std::string IN, double T) | 
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| std::string | get_SQ () | 
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| std::string | get_SQ (double T) | 
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| std::string | get_TOTAL_SQ () | 
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| std::string | get_TOTAL_SQ (double T) | 
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| std::string | get_MOD_SQ () | 
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| std::string | get_MOD_SQ (double T) | 
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| double | get_pep_prob () | 
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| double | get_pep_prob (double T) | 
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| std::string | get_MS2_TYPE_TAG () | 
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| std::string | get_MS2_TYPE_TAG (double T) | 
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| int | get_MS2_scan () | 
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| int | get_MS2_scan (double T) | 
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| std::map< double, std::vector < MS2Info > > *
 | get_MS2_SCAN_LIST () | 
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| std::map< double, std::vector < MS2Info > >::iterator
 | get_MS2_SCAN_LIST_START () | 
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| std::map< double, std::vector < MS2Info > >::iterator
 | get_MS2_SCAN_LIST_END () | 
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| int | get_scan_number () | 
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| void | set_scan_number (int IN) | 
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| int | get_scan_start () | 
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| void | set_scan_start (int IN) | 
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| int | get_scan_end () | 
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| void | set_scan_end (int IN) | 
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| int | get_charge_state () | 
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| void | set_charge_state (int IN) | 
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| void | set_peak_area (float IN) | 
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| double | get_peak_area () | 
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| double | get_peak_area (int) | 
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| double | get_apex_peak_intensity () | 
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| void | set_apex_peak_intensity (double in) | 
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| void | normalize_peak_area_by_factor (double factor) | 
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| double | get_alignment_error_up () | 
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| void | set_alignment_error_up (double IN) | 
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| double | get_alignment_error_down () | 
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| void | set_alignment_error_down (double IN) | 
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| void | set_SCORE_HOLDER (double IN) | 
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| double | get_SCORE_HOLDER () | 
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| double | get_retention_time () | 
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| void | set_retention_time (double IN) | 
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| double | get_retention_time_START () | 
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| void | set_retention_time_START (double IN) | 
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| double | get_retention_time_END () | 
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| void | set_retention_time_END (double IN) | 
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| double | get_raw_retention_time_apex () | 
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| void | set_raw_retention_time_apex (double IN) | 
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| double | get_raw_MZ () | 
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| void | set_raw_MZ (double IN) | 
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| void | set_feature_ID (int IN) | 
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| int | get_feature_ID () | 
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| void | set_spectrum_ID (int IN) | 
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| int | get_spectrum_ID () | 
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| void | set_MASTER_ID (int IN) | 
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| int | get_MASTER_ID () | 
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| int | get_nb_common_match () | 
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| double | get_peak_score () | 
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| void | set_peak_score (double in) | 
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| double | get_Molecular_Mass () | 
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| double | get_FEATURE_PI () | 
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| void | set_FEATURE_PI (double IN) | 
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| void | deriveChargeStates (SHFeature *) | 
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| void | setLCelutionProfile (FeatureLCProfile *IN) | 
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| FeatureLCProfile * | getLCelutionProfile () | 
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| double | get_profile_retention_time () | 
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| double | get_profile_Molecular_Mass () | 
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| bool | get_feature_match_status () | 
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| void | set_feature_match_status (bool IN) | 
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| void | addMS2Feature (MS2Feature *in) | 
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| void | removeMS2Feature () | 
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| MS2Feature * | getMS2Feature () | 
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| double | getSignalToNoise () | 
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| void | setSignalToNoise (double in) | 
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| double | getBackgroundNoiseLevel () | 
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| void | setBackgroundNoiseLevel (double in) | 
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