A 1-dimensional raw data point or peak. More...
#include <OpenMS/KERNEL/Peak1D.h>
 
  
 | Classes | |
| struct | IntensityLess | 
| struct | MZLess | 
| Comparator by m/z position.  More... | |
| struct | PositionLess | 
| Comparator by position. As this class has dimension 1, this is basically an alias for MZLess.  More... | |
| Public Types | |
| Type definitions | |
| Dimension | |
| enum | { DIMENSION = 1 } | 
| typedef Real | IntensityType | 
| Intensity type.  More... | |
| typedef DPosition< 1 > | PositionType | 
| Position type.  More... | |
| typedef DoubleReal | CoordinateType | 
| Coordinate type.  More... | |
| Public Member Functions | |
| Peak1D & | operator= (const Peak1D &rhs) | 
| Assignment operator.  More... | |
| bool | operator== (const Peak1D &rhs) const | 
| Equality operator.  More... | |
| bool | operator!= (const Peak1D &rhs) const | 
| Equality operator.  More... | |
| Constructors and Destructor | |
| Default constructor | |
| Peak1D () | |
| Peak1D (const Peak1D &p) | |
| Copy constructor.  More... | |
| ~Peak1D () | |
| Destructor.  More... | |
| Accessors | |
| IntensityType | getIntensity () const | 
| void | setIntensity (IntensityType intensity) | 
| Mutable access to the data point intensity (height)  More... | |
| CoordinateType | getMZ () const | 
| Non-mutable access to m/z.  More... | |
| void | setMZ (CoordinateType mz) | 
| Mutable access to m/z.  More... | |
| CoordinateType | getPos () const | 
| Alias for getMZ()  More... | |
| void | setPos (CoordinateType pos) | 
| Alias for setMZ()  More... | |
| PositionType const & | getPosition () const | 
| Non-mutable access to the position.  More... | |
| PositionType & | getPosition () | 
| Mutable access to the position.  More... | |
| void | setPosition (PositionType const &position) | 
| Mutable access to the position.  More... | |
| Protected Attributes | |
| PositionType | position_ | 
| The data point position.  More... | |
| IntensityType | intensity_ | 
| The data point intensity.  More... | |
A 1-dimensional raw data point or peak.
This datastructure is intended for continuous data or peak data. If wou want to annotated single peaks with meta data, use RichPeak1D instead.
| typedef DoubleReal CoordinateType | 
Coordinate type.
| typedef Real IntensityType | 
Intensity type.
| typedef DPosition<1> PositionType | 
Position type.
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 | inline | 
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 | inline | 
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 | inline | 
Non-mutable access to the data point intensity (height)
Referenced by Peak1D::IntensityLess::operator()(), MzMLHandler< MapType >::writePrecursor_(), MzDataHandler< MapType >::writeTo(), and MzXMLHandler< MapType >::writeTo().
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 | inline | 
Non-mutable access to m/z.
Referenced by OfflinePrecursorIonSelection::makePrecursorSelectionForKnownLCMSMap(), Peak1D::MZLess::operator()(), DTAFile::store(), MzMLHandler< MapType >::writePrecursor_(), MzDataHandler< MapType >::writeTo(), and MzXMLHandler< MapType >::writeTo().
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 | inline | 
Alias for getMZ()
| 
 | inline | 
Non-mutable access to the position.
Referenced by Peak1D::PositionLess::operator()().
| 
 | inline | 
Mutable access to the position.
| 
 | inline | 
Equality operator.
Assignment operator.
References Peak1D::intensity_, and Peak1D::position_.
Referenced by RichPeak1D::operator=().
| 
 | inline | 
Equality operator.
References Peak1D::intensity_, and Peak1D::position_.
Referenced by RichPeak1D::operator==().
| 
 | inline | 
Mutable access to the data point intensity (height)
Referenced by OfflinePrecursorIonSelection::makePrecursorSelectionForKnownLCMSMap(), EmgScoring::prepareFit_(), CachedmzML::readSpectrum_(), and FeatureFinderAlgorithmMRM< PeakType, FeatureType >::run().
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 | inline | 
Mutable access to m/z.
Referenced by IDEvaluationBase::getPoints(), DTAFile::load(), TOPPRNPxl::main_(), OfflinePrecursorIonSelection::makePrecursorSelectionForKnownLCMSMap(), EmgScoring::prepareFit_(), ChromatogramExtractor::prepareSpectra_(), CachedmzML::readSpectrum_(), FeatureFinderAlgorithmMRM< PeakType, FeatureType >::run(), and TOPPViewBase::showSpectrumGenerationDialog().
| 
 | inline | 
Alias for setMZ()
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 | inline | 
Mutable access to the position.
Referenced by MSSpectrum< RichPeak1D >::MZBegin(), and MSSpectrum< RichPeak1D >::MZEnd().
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 | protected | 
The data point intensity.
Referenced by Peak1D::operator=(), and Peak1D::operator==().
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 | protected | 
The data point position.
Referenced by Peak1D::operator=(), and Peak1D::operator==().
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:32 using doxygen 1.8.5 |