36 #ifndef OPENMS_VISUAL_SPECTRUM2DCANVAS_H 
   37 #define OPENMS_VISUAL_SPECTRUM2DCANVAS_H 
   80     virtual void showCurrentLayerPreferences();
 
   83     virtual void saveCurrentLayer(
bool visible);
 
   92     void mergeIntoLayer(
Size i, std::vector<PeptideIdentification>& peptides);
 
   95     void recalculateCurrentLayerDotGradient();
 
  103     void showProjectionInfo(
int, 
double, 
double);
 
  105     void toggleProjections();
 
  107     void showSpectrumAs1D(
int index);
 
  108     void showSpectrumAs1D(std::vector<
int, std::allocator<int> > indices);
 
  110     void showCurrentPeaksAs3D();
 
  114     void activateLayer(
Size layer_index);
 
  116     void removeLayer(
Size layer_index);
 
  118     virtual void updateLayer(
Size i);
 
  120     virtual void horizontalScrollBarChange(
int value);
 
  122     virtual void verticalScrollBarChange(
int value);
 
  133     void updateProjections();
 
  138     void currentLayerParametersChanged_();
 
  142     bool finishAdding_();
 
  145     void drawCoordinates_(QPainter& painter, 
const PeakIndex& peak);
 
  151     void mousePressEvent(QMouseEvent* e);
 
  152     void mouseReleaseEvent(QMouseEvent* e);
 
  153     void mouseMoveEvent(QMouseEvent* e);
 
  154     void paintEvent(QPaintEvent* e);
 
  155     void contextMenuEvent(QContextMenuEvent* e);
 
  156     void keyPressEvent(QKeyEvent* e);
 
  157     void keyReleaseEvent(QKeyEvent* e);
 
  158     void mouseDoubleClickEvent(QMouseEvent* e);
 
  162     virtual void updateScrollbars_();
 
  172     void paintDots_(
Size layer_index, QPainter& p);
 
  174     void paintAllIntensities_(
Size layer_index, 
DoubleReal pen_width, QPainter& painter);
 
  187     void paintMaximumIntensities_(
Size layer_index, 
Size rt_pixel_count, 
Size mz_pixel_count, QPainter& p);
 
  195     void paintPrecursorPeaks_(
Size layer_index, QPainter& painter);
 
  203     void paintFeatureData_(
Size layer_index, QPainter& p);
 
  211     void paintTraceConvexHulls_(
Size layer_index, QPainter& p);
 
  219     void paintFeatureConvexHulls_(
Size layer_index, QPainter& p);
 
  227     void paintIdentifications_(
Size layer_index, QPainter& p);
 
  235     void paintConsensusElements_(
Size layer_index, QPainter& p);
 
  245     void paintConsensusElement_(
Size layer_index, 
const ConsensusFeature& cf, QPainter& p, 
bool use_buffer);
 
  261     void paintConvexHulls_(
const std::vector<ConvexHull2D>& hulls, 
bool hasIdentifications, QPainter& p);
 
  264     virtual void intensityModeChange_();
 
  266     virtual void recalculateSnapFactor_();
 
  281       switch (intensity_mode_)
 
  288         gradientPos = val * percentage_factor_;
 
  292         gradientPos = val * snap_factor;
 
  296         gradientPos = std::log(val + 1);
 
  327         point.setX(
int((y - visible_area_.minY()) / visible_area_.height() * width()));
 
  328         point.setY(height() - 
int((x - visible_area_.minX()) / visible_area_.width() * height()));
 
  332         point.setX(
int((x - visible_area_.minX()) / visible_area_.width() * width()));
 
  333         point.setY(height() - 
int((y - visible_area_.minY()) / visible_area_.height() * height()));
 
  338     void recalculateDotGradient_(
Size layer);
 
  341     void highlightPeak_(QPainter& p, 
const PeakIndex& peak);
 
  344     PeakIndex findNearestPeak_(
const QPoint& pos);
 
  347     void paintIcon_(
const QPoint& pos, 
const QRgb& color, 
const String& icon, 
Size s, QPainter& p) 
const;
 
  358     virtual void translateLeft_();
 
  360     virtual void translateRight_();
 
  362     virtual void translateForward_();
 
  364     virtual void translateBackward_();
 
  367     void finishContextMenu_(QMenu* context_menu, QMenu* settings_menu);
 
LayerData::ExperimentSharedPtrType ExperimentSharedPtrType
Main managed data type (experiment) 
Definition: SpectrumCanvas.h:107
float Real
Real type. 
Definition: Types.h:109
A more convenient string class. 
Definition: String.h:56
PeakIndex measurement_start_
start peak/feature of measuring mode 
Definition: Spectrum2DCanvas.h:352
DrawModes
Enumerate all avaiable paint styles. 
Definition: Spectrum1DCanvas.h:84
LayerData::ConsensusMapSharedPtrType ConsensusMapSharedPtrType
Main managed data type (consensus features) 
Definition: SpectrumCanvas.h:115
Base class for visualization canvas classes. 
Definition: SpectrumCanvas.h:94
QColor heightColor_(Real val, const MultiGradient &gradient, DoubleReal snap_factor)
Returns the color associated with val for the gradient gradient. 
Definition: Spectrum2DCanvas.h:310
Canvas for 2D-visualization of peak map, feature map and consensus map data. 
Definition: Spectrum2DCanvas.h:67
Int precalculatedColorIndex_(Real val, const MultiGradient &gradient, DoubleReal snap_factor)
Returns the position on color gradient associated with given intensity. 
Definition: Spectrum2DCanvas.h:278
void dataToWidget_(DoubleReal x, DoubleReal y, QPoint &point)
Convert chart to widget coordinates. 
Definition: Spectrum2DCanvas.h:323
Management and storage of parameters / INI files. 
Definition: Param.h:69
ExperimentType projection_rt_
RT projection data. 
Definition: Spectrum2DCanvas.h:271
Int precalculatedColorIndex(DoubleReal position) const 
index of color in precalculated table by position in gradient 
Definition: MultiGradient.h:134
LayerData::FeatureMapSharedPtrType FeatureMapSharedPtrType
Main managed data type (features) 
Definition: SpectrumCanvas.h:111
size_t Size
Size type e.g. used as variable which can hold result of size() 
Definition: Types.h:144
ExperimentType projection_mz_
m/z projection data 
Definition: Spectrum2DCanvas.h:269
QColor precalculatedColorByIndex(Int index) const 
precalculated color by its index in the table 
Definition: MultiGradient.h:145
PeakIndex selected_peak_
the nearest peak/feature to the mouse cursor 
Definition: Spectrum2DCanvas.h:350
A gradient of multiple colors and arbitrary distances between colors. 
Definition: MultiGradient.h:65
int Int
Signed integer type. 
Definition: Types.h:100
Not implemented exception. 
Definition: Exception.h:437
A 2-dimensional consensus feature. 
Definition: ConsensusFeature.h:59
Index of a peak or feature. 
Definition: PeakIndex.h:51