#include <numeric>#include <map>#include <vector>#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/OpenSwathAlgoConfig.h>Go to the source code of this file.
| Namespaces | |
| OpenSwath | |
| OpenSwath::Scoring | |
| Scoring functions used by MRMScoring. | |
| Typedefs | |
| Type defs | |
| typedef std::map< int, double > | XCorrArrayType | 
| Cross Correlation array.  More... | |
| Functions | |
| Helper functions | |
| OPENSWATHALGO_DLLAPI double | RMSD (double x[], double y[], int n) | 
| Fxn "deltaRatioSum" from mQuest to calculate similarity between library intensity and experimental ones.  More... | |
| OPENSWATHALGO_DLLAPI XCorrArrayType | calcxcorr (std::vector< double > &data1, std::vector< double > &data2, bool normalize) | 
| Calculate crosscorrelation on std::vector data.  More... | |
| OPENSWATHALGO_DLLAPI XCorrArrayType | normalizedCalcxcorr (std::vector< double > &data1, std::vector< double > &data2, int maxdelay, int lag) | 
| Calculate crosscorrelation on std::vector data (which is first normalized)  More... | |
| OPENSWATHALGO_DLLAPI XCorrArrayType | calcxcorr_new (std::vector< double > &data1, std::vector< double > &data2, int maxdelay, int lag) | 
| Calculate crosscorrelation on std::vector data without normalization.  More... | |
| OPENSWATHALGO_DLLAPI XCorrArrayType::iterator | xcorrArrayGetMaxPeak (XCorrArrayType &array) | 
| Find best peak in an cross-correlation (highest apex)  More... | |
| OPENSWATHALGO_DLLAPI void | standardize_data (std::vector< double > &data) | 
| Standardize a vector (subtract mean, divide by standard deviation)  More... | |
| OPENSWATHALGO_DLLAPI void | normalize_sum (double x[], unsigned int n) | 
| divide each element of x by the sum of the vector  More... | |
| OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:23 using doxygen 1.8.5 |